Kingsley Idehen's Blog Data Space

We have reached a beachead re. the Virtuoso instance hosting the Linked Open Data (LOD) Cloud; meaning, we are not going to be performing any major updates and deletions short-term, bar incorporation of fresh data sets from the Freebase and Bio2RDF projects (both communities a prepping new RDF data sets).

At the current time we have loaded 100% of all the very large data sets from the LOD Cloud. As result, we can start the process of exposing Linked Data virtues in a manner that's palatable to users, developers, and database professionals across the Web 1.0, 2.0, and 3.0 spectrums.

What does this mean?

You can use the "Search & Find" or"URI Lookup" or SPARQL endpoint associated with the LOD cloud hosting instance to perform the following tasks:

1. Find entities associated with full text search patterns -- Google Style, but with Entity & Text proximity Rank instead of Page Rank, since we are dealing with Entities rather than documents about entities
2. Find and Lookup entities by Identifier (URI) -- which is helpful when locating URIs to use for identify entities in your own linked data spaces on the Web
3. View entity descriptions via a variety of representation formats (HTML, RDFa, RDF/XML, N3, Turtle etc.)
4. Determine uses of entity identifiers across the LOD cloud -- which helps you select preferred URIs based on usage statistics.

What does it offer Web 1.0 and 2.0 developers?

If you don't want to use the SPARQL based Web Service, or other Linked Data Web oriented APIs for interacting with the LOD cloud programmatically, you can simply use the powerful REST style Web Service that provides URL parameters for performing full text oriented "Search", entity oriented "Find" queries, and faceted navigation over the huge data corpus with results data returned in JSON and XML formats.

Next Steps:

Amazon have agreed to add all the LOD Cloud data sets to their existing public data sets collective. Thus, the data sets we are loading will be available in "raw data" (RDF) format on the public data sets page via Named Elastic Block Storage (EBS) Snapshots); meaning, you can make an EC2 AMI (e.g. a Linux, Windows, Solaris) and install an RDF quad or triple store of choice into your AMI, then simply load data from the LOD cloud based on your needs.

In addition to the above, we are also going to offer a Virtuoso 6.0 Cluster Edition based LOD Cloud AMI (as we've already done with DBpedia, MusicBrainz, NeuroCommons, and Bio2Rdf) that will enable you to simply instantiate a personal and service specific edition of Virtuoso with all the LOD data in place and fully tuned for performance and scalability; basically, you will simply press "Instantiate AMI" and a LOD cloud data space, in true Linked Data from, will be at your disposal within minutes (i.e. the time it takes the DB to start).

Work on the migration of the LOD data to EC2 starts this week. Thus, if you are interested in contributing an RDF based data set to the LOD cloud now is the time to get your archive links in place on the (see: ESW Wiki page for LOD Data Sets).

We have reached a beachead re. the Virtuoso instance hosting the Linked Open Data (LOD) Cloud; meaning, we are not going to be performing any major updates and deletions short-term, bar incorporation of fresh data sets from the Freebase and Bio2RDF projects (both communities a prepping new RDF data sets).

At the current time we have loaded 100% of all the very large data sets from the LOD Cloud. As result, we can start the process of exposing Linked Data virtues in a manner that's palatable to users, developers, and database professionals across the Web 1.0, 2.0, and 3.0 spectrums.

What does this mean?

You can use the "Search & Find" or"URI Lookup" or SPARQL endpoint associated with the LOD cloud hosting instance to perform the following tasks:

1. Find entities associated with full text search patterns -- Google Style, but with Entity & Text proximity Rank instead of Page Rank, since we are dealing with Entities rather than documents about entities
2. Find and Lookup entities by Identifier (URI) -- which is helpful when locating URIs to use for identify entities in your own linked data spaces on the Web
3. View entity descriptions via a variety of representation formats (HTML, RDFa, RDF/XML, N3, Turtle etc.)
4. Determine uses of entity identifiers across the LOD cloud -- which helps you select preferred URIs based on usage statistics.

What does it offer Web 1.0 and 2.0 developers?

If you don't want to use the SPARQL based Web Service, or other Linked Data Web oriented APIs for interacting with the LOD cloud programmatically, you can simply use the powerful REST style Web Service that provides URL parameters for performing full text oriented "Search", entity oriented "Find" queries, and faceted navigation over the huge data corpus with results data returned in JSON and XML formats.

Next Steps:

Amazon have agreed to add all the LOD Cloud data sets to their existing public data sets collective. Thus, the data sets we are loading will be available in "raw data" (RDF) format on the public data sets page via Named Elastic Block Storage (EBS) Snapshots); meaning, you can make an EC2 AMI (e.g. a Linux, Windows, Solaris) and install an RDF quad or triple store of choice into your AMI, then simply load data from the LOD cloud based on your needs.

In addition to the above, we are also going to offer a Virtuoso 6.0 Cluster Edition based LOD Cloud AMI (as we've already done with DBpedia, MusicBrainz, NeuroCommons, and Bio2Rdf) that will enable you to simply instantiate a personal and service specific edition of Virtuoso with all the LOD data in place and fully tuned for performance and scalability; basically, you will simply press "Instantiate AMI" and a LOD cloud data space, in true Linked Data from, will be at your disposal within minutes (i.e. the time it takes the DB to start).

Work on the migration of the LOD data to EC2 starts this week. Thus, if you are interested in contributing an RDF based data set to the LOD cloud now is the time to get your archive links in place on the (see: ESW Wiki page for LOD Data Sets).

We have reached a beachead re. the Virtuoso instance hosting the Linked Open Data (LOD) Cloud; meaning, we are not going to be performing any major updates and deletions short-term, bar incorporation of fresh data sets from the Freebase and Bio2RDF projects (both communities a prepping new RDF data sets).

At the current time we have loaded 100% of all the very large data sets from the LOD Cloud. As result, we can start the process of exposing Linked Data virtues in a manner that's palatable to users, developers, and database professionals across the Web 1.0, 2.0, and 3.0 spectrums.

What does this mean?

You can use the "Search & Find" or"URI Lookup" or SPARQL endpoint associated with the LOD cloud hosting instance to perform the following tasks:

1. Find entities associated with full text search patterns -- Google Style, but with Entity & Text proximity Rank instead of Page Rank, since we are dealing with Entities rather than documents about entities
2. Find and Lookup entities by Identifier (URI) -- which is helpful when locating URIs to use for identify entities in your own linked data spaces on the Web
3. View entity descriptions via a variety of representation formats (HTML, RDFa, RDF/XML, N3, Turtle etc.)
4. Determine uses of entity identifiers across the LOD cloud -- which helps you select preferred URIs based on usage statistics.

What does it offer Web 1.0 and 2.0 developers?

If you don't want to use the SPARQL based Web Service, or other Linked Data Web oriented APIs for interacting with the LOD cloud programmatically, you can simply use the powerful REST style Web Service that provides URL parameters for performing full text oriented "Search", entity oriented "Find" queries, and faceted navigation over the huge data corpus with results data returned in JSON and XML formats.

Next Steps:

Amazon have agreed to add all the LOD Cloud data sets to their existing public data sets collective. Thus, the data sets we are loading will be available in "raw data" (RDF) format on the public data sets page via Named Elastic Block Storage (EBS) Snapshots); meaning, you can make an EC2 AMI (e.g. a Linux, Windows, Solaris) and install an RDF quad or triple store of choice into your AMI, then simply load data from the LOD cloud based on your needs.

In addition to the above, we are also going to offer a Virtuoso 6.0 Cluster Edition based LOD Cloud AMI (as we've already done with DBpedia, MusicBrainz, NeuroCommons, and Bio2Rdf) that will enable you to simply instantiate a personal and service specific edition of Virtuoso with all the LOD data in place and fully tuned for performance and scalability; basically, you will simply press "Instantiate AMI" and a LOD cloud data space, in true Linked Data from, will be at your disposal within minutes (i.e. the time it takes the DB to start).

Work on the migration of the LOD data to EC2 starts this week. Thus, if you are interested in contributing an RDF based data set to the LOD cloud now is the time to get your archive links in place on the (see: ESW Wiki page for LOD Data Sets).

Here are some examples of how we distill Entities (People, Places, Music, and other things) from Freebase (X)HTML pages (meaning: we don't have to start from RDF information resources as data sources for the eventual RDF Linked Data we generate):

• Barack Obama
• Hillary Rodham Clinton
• Johan McCain

Tip: Install our OpenLink Data Explorer extension for Firefox. Once installed, simply browse through Freebase, and whenever you encounter a page about something of interest, simply use the following sequences to distill (via the Page Description feature) the entities from the page you are reading:

• CTRL-Click (Mac OS X)
• Right+Click (Windows & Linux)

Related

• State of the Linked Data Web
• Dynamic Linked Data Web Constellation

Runtime hosting is functionality realm of Virtuoso that is sometimes easily overlooked. In this post I want to provide a simple no-hassles HOWTO guide for installing Virtuoso on Windows (32 or 64 Bit), Mac OS X (Universal or Native 64 Bit), and Linux (32 or 64 Bit). The installation guide also covers the instantiation of phpBB3 as verification of the Virtuoso hosted PHP 3.5 runtime.

What are the benefits of PHP Runtime Hosting?

Like Apache, Virtuoso is a bona-fide Web Application Server for PHP based applications. Unlike Apache, Virtuoso is also the following:

• a Hybrid Native DBMS Engine (Relational, RDF-Graph, and Document models) that is accessible via industry standard interfaces (solely)
• a Virtual DBMS or Master Data Manager (MDM) that virtualizes heterogeneous data sources (ODBC, JDBC, Web Services, Hypermedia Resources, Non Hypermedia Resources)
• an RDF Middleware solution for RDF-zation of non RDF resources across the Web and enterprise Intranets and/or Extranets (in the form of Cartridges for data exposed via REST or SOA oriented SOAP interfaces)
• an RDF Linked Data Server (meaning it can deploy RDF Linked Data based on its native and/or virtualized data)

As result of the above, when you deploy a PHP application using Virtuoso, you inherit the following benefits:

1. Use of PHP-iODBC for in-process communication with Virtuoso
2. Easy generation of RDF Linked Data Views atop the SQL schemas of PHP applications
3. Easy deployment of RDF Linked Data from virtualized data sources
4. Less LAMP monoculture (*there is no such thing as virtuous monoculture*) when dealing with PHP based Web applications.

As indicated in prior posts, producing RDF Linked Data from the existing Web, where a lot of content is deployed by PHP based content managers, should simply come down to RDF Views over the SQL Schemas and deployment / publishing of the RDF Views in RDF Linked data form. In a nutshell, this is what Virtuoso delivers via its PHP runtime hosting and pre packaged VADs (Virtuoso Application Distribution packages), for popular PHP based applications such as: phpBB3, Drupal, WordPress, and MediaWiki.

In addition, to the RDF Linked Data deployment, we've also taken the traditional LAMP installation tedium out of the typical PHP application deployment process. For instance, you don't have to rebuild PHP 3.5 (32 or 64 Bit) on Windows, Mac OS X, or Linux to get going, simply install Virtuoso, and then select a VAD package for the relevant application and you're set. If the application of choice isn't pre packaged by us, simply install as you would when using Apache, which comes dow to situating the PHP files in your Web structure under the Web Application's root directory.

Installation Guide

1. Download the Virtuoso installer for Windows (32 Bit msi file or 64 Bit msi file), Mac OS X (Universal Binary dmg file), or instantiate the Virtuoso EC2 AMI (*search for pattern: "Virtuoso when using the Firefox extension for EC2 as the AMI ID is currently: ami-7c31d515 and name: virtuoso-test/virtuoso-cloud-beta-9-i386.manifest.xml, for latest cut*)
2. Run the installer (or download the movies using the links in the related section below)
3. Go to the Virtuoso Conductor (*which will show up at the end of the installation process* or go to http://localhost:8890/conductor)
4. Go to the "Admin" tab within the (X)HTML based UI and select the "Packages" sub-menu item (a Tab)
5. Pick phpBB3 (or any other pre-packaged PHP app) and then click on "Install/Upgrase"
6. The watch one of my silent movies or read the initial startup guides for Virtuoso hosted phpBB3, Drupal, Wordpress, MediaWiki.

Related

At the current time, I've only provided links to ZIP files containing the Virtuoso installation "silent movies". This approach is a short-term solution to some of my current movie publishing challenges re. YouTube and Vimeo -- where the compressed output hasn't been of acceptable visual quality. Once resolved, I will publish much more "Multimedia Web" friendly movies :-)

• Windows Vista (x64) Installation Movie
• Mac OS X (x64 & Universal binary) Installation Movie
• Virtuoso EC2 Cloud Edition Installation Movie
• Guide for PHP based Application Deployment using Virtuoso

Runtime hosting is functionality realm of Virtuoso that is sometimes easily overlooked. In this post I want to provide a simple no-hassles HOWTO guide for installing Virtuoso on Windows (32 or 64 Bit), Mac OS X (Universal or Native 64 Bit), and Linux (32 or 64 Bit). The installation guide also covers the instantiation of phpBB3 as verification of the Virtuoso hosted PHP 3.5 runtime.

What are the benefits of PHP Runtime Hosting?

Like Apache, Virtuoso is a bona-fide Web Application Server for PHP based applications. Unlike Apache, Virtuoso is also the following:

• a Hybrid Native DBMS Engine (Relational, RDF-Graph, and Document models) that is accessible via industry standard interfaces (solely)
• a Virtual DBMS or Master Data Manager (MDM) that virtualizes heterogeneous data sources (ODBC, JDBC, Web Services, Hypermedia Resources, Non Hypermedia Resources)
• an RDF Middleware solution for RDF-zation of non RDF resources across the Web and enterprise Intranets and/or Extranets (in the form of Cartridges for data exposed via REST or SOA oriented SOAP interfaces)
• an RDF Linked Data Server (meaning it can deploy RDF Linked Data based on its native and/or virtualized data)

As result of the above, when you deploy a PHP application using Virtuoso, you inherit the following benefits:

1. Use of PHP-iODBC for in-process communication with Virtuoso
2. Easy generation of RDF Linked Data Views atop the SQL schemas of PHP applications
3. Easy deployment of RDF Linked Data from virtualized data sources
4. Less LAMP monoculture (*there is no such thing as virtuous monoculture*) when dealing with PHP based Web applications.

As indicated in prior posts, producing RDF Linked Data from the existing Web, where a lot of content is deployed by PHP based content managers, should simply come down to RDF Views over the SQL Schemas and deployment / publishing of the RDF Views in RDF Linked data form. In a nutshell, this is what Virtuoso delivers via its PHP runtime hosting and pre packaged VADs (Virtuoso Application Distribution packages), for popular PHP based applications such as: phpBB3, Drupal, WordPress, and MediaWiki.

In addition, to the RDF Linked Data deployment, we've also taken the traditional LAMP installation tedium out of the typical PHP application deployment process. For instance, you don't have to rebuild PHP 3.5 (32 or 64 Bit) on Windows, Mac OS X, or Linux to get going, simply install Virtuoso, and then select a VAD package for the relevant application and you're set. If the application of choice isn't pre packaged by us, simply install as you would when using Apache, which comes dow to situating the PHP files in your Web structure under the Web Application's root directory.

Installation Guide

1. Download the Virtuoso installer for Windows (32 Bit msi file or 64 Bit msi file), Mac OS X (Universal Binary dmg file), or instantiate the Virtuoso EC2 AMI (*search for pattern: "Virtuoso when using the Firefox extension for EC2 as the AMI ID is currently: ami-7c31d515 and name: virtuoso-test/virtuoso-cloud-beta-9-i386.manifest.xml, for latest cut*)
2. Run the installer (or download the movies using the links in the related section below)
3. Go to the Virtuoso Conductor (*which will show up at the end of the installation process* or go to http://localhost:8890/conductor)
4. Go to the "Admin" tab within the (X)HTML based UI and select the "Packages" sub-menu item (a Tab)
5. Pick phpBB3 (or any other pre-packaged PHP app) and then click on "Install/Upgrase"
6. The watch one of my silent movies or read the initial startup guides for Virtuoso hosted phpBB3, Drupal, Wordpress, MediaWiki.

Related

At the current time, I've only provided links to ZIP files containing the Virtuoso installation "silent movies". This approach is a short-term solution to some of my current movie publishing challenges re. YouTube and Vimeo -- where the compressed output hasn't been of acceptable visual quality. Once resolved, I will publish much more "Multimedia Web" friendly movies :-)

• Windows Vista (x64) Installation Movie
• Mac OS X (x64 & Universal binary) Installation Movie
• Virtuoso EC2 Cloud Edition Installation Movie
• Guide for PHP based Application Deployment using Virtuoso

At OpenLink, we've been investigating LinqToRdf, an exciting project from Andrew Matthews that seeks to expose the Semantic Web technology space to the large community of .NET developers.

The LinqToRdf project is about binding LINQ to RDF. It sits atop Joshua Tauberer's C# based Semantic Web/RDF library which has been out there for a while and works across Microsoft .NET and it's open source variant "Mono".

Historically, the Semantic Web realm has been dominated by RDF frameworks such as Sesame, Jena and Redland; which by their Open Source orientation, predominantly favor non-Windows platforms (Java and Linux). Conversely, Microsoft's .NET frameworks have sought to offer Conceptualization technology for heterogeneous Logical Data Sources via .NET's Entity Frameworks and ADO.NET, but without any actual bindings to RDF.

Interestingly, believe it or not, .NET already has a data query language that shares a number of similarities with SPARQL, called Entity-SQL, and a very innovative programming language called LINQ; that offers a blend of constructs for natural data access and manipulation across relational (SQL), hierarchical (XML), and graph (Object) models without the traditional object language->database impedance tensions of the past.

With regards to all of the above, we've just released a mini white paper that covers the exploitation of RDF-based Linked Data using .NET via LINQ. The paper offers a an overview of LinqToRdf, plus enhancements we've contributed to the project (available in LinqToRdf v0.8.). The paper includes real-world examples that tap into a MusicBrainz powered Linked Data Space, the Music Ontology, the Virtuoso RDF Quad Store, Virtuoso Sponger Middleware, and our RDfization Cartridges for Musicbrainz.

I've written extensively on the subject of Data Spaces in relation to the Data Web for while. I've also written sparingly about OpenLink Data Spaces (a Data Web Platform that build using Virtuoso). On the other hand, I haven't shed much light on installation and deployment of OpenLink Data Spaces.

Jon Udell recently penned a post titled: The Fourth Platform. The post arrives at a spookily coincidental time (this happens quite often between Jon and I as demonstrated last year during our podcast; the "Fourth" in his Innovators Podcast series).

The platform that Jon describes is "Cloud Based" and comprised of Storage and Computation. I would like to add Data Access and Management (native and virtual) under the fourth platform banner with the end product called: "Cloud based Data Spaces".

As I write, we are releasing a Virtuoso AMI (Amazon Image) labeled: virtuoso-dataspace-server. This edition of Virtuoso includes the OpenLink Data Spaces Layer and all of the OAT applications we've been developing for a while.

What Benefits Does this offer?

1. Personal Data Spaces in the Cloud - a place where you can control and consolidate data across your Blogs, Wikis, RSS/Atom Feed Subscriptions, Shared Bookmarks, Shared Calendars, Discussion Threads, Photo Galleries etc
2. All the data in your Data Space is SPARQL or GData accessible.
3. All of the data in your Personal Data Space is Linked Data from the get go. Each Item of data is URI addressable
4. SIOC support - your Blogs, Wikis, Bookmarks etc.. are based on the SIOC ontology for Semantically Interlinking Online Communities (think: Open social-graph++)
5. FOAF support - your FOAF Profile page provides a URI that is an in-road to all Data in your Data Space.
6. OpenID support - your Personal Data Space ID is usable wherever OpenID is supported. OpenID and FOAF are integrated as per latest FOAF specs
7. Two Integration with Facebook - You can access your Data Space from Facebook or access Facebook from your Data Space
8. Unified Storage - The WebDAV based filesystem provides Cloud Storage that's integrated with Amazon S3; It also exposes all of your Data Space data via a traditional filesystem UI (think virtual Spotlight); You can also mount this drive to your local filesystem via your native operating system's WebDAV support
9. SyncML - you can sync calendar and contact details with your Data Space in the cloud from your Mobile phone.
10. A practical Semantic Data Web solution - based on Web Infrastructure and doesn't require you to do anything beyond exposing URIs for data in your Data Spaces.

EC2-AMI Details:

AMI ID: ami-e2ca2f8b

Manifest file: virtuoso-images/virtuoso-dataspace-server.manifest.xml

Installation Guide:

1. Get an Amazon Web Services (AWS) account
2. Signup for S3 and EC2 services
3. Install the EC2 plugin for Firefox
4. Start the EC2 plugin
5. Locate the row containing ami-7c31d515  Manifest virtuoso-test/virtuoso-cloud-beta-9-i386.manifest.xml (sort using the AMI ID or Manifest Columns or search on pattern: virtuoso, due to name flux)
6. Start the Virtuoso Data Space Server AMI
7. Wait 4-5 minutes (*take a few minutes to create the pre-configured Linux Image*)
8. Connect to http://http://your-ec2-instance-cname:8890/ Log in with user/password dba/dba
9. Go to the Admin UI (Virtuoso Conductor) and change the PWDs for the 'dba' and 'dav' accounts (*Important!*)
10. Give the "SPARQL" user "SPARQL_UPDATE" privileges (required if you want to exploit the in-built Sponger Middleware)
11. Click on the ODS (OpenLink Data Spaces) link to start an Personal Editon of OpenLink Data Spaces (or go to: http://your-ec2-instance-cname/dataspace/ods/index.html)
12. Log-in using the username and password credentials for the 'dav' account (or register a new user note: OpenID is an option here also) Create an Data Space Application Instance by clicking on a Data Space App. Tab
13. Import data from your existing Web 2.0 style applications into OpenLink Data Spaces e.g. subscribe to a few RSS/Atom feeds via the "Feeds Manager" application or import some Bookmarks using the "Bookmarks" application
14. Then look at the imported data in Linked Data form via your ODS generated URIs based on the patterns: http://your-ec2-instance-cname/dataspace/person/your-ods-id#this (URI for You the Person), http://your-ec2-instance-cname/dataspace/person/your-ods-id (FOAF File URI), http://your-ec2-instance-cname/dataspace/your-ods-id (SIOC File URI)
    

(OAT) from your Data Space instance

1. http://:8890/oatdemo - Entire OAT Demo Collection
2. http://:8890/rdfbrowser - RDF Browser
3. http://:8890/isparql - SPARQL Query Builder (iSPARQL)
4. http://:8890/qbe - SQL Query Builder (iSQL)
5. http://:8890/formdesigner - Forms Builder (for building Meshups based on RDF, SQL, or Web Servives Data Souces)
6. http://:8890/dbdesigner - SQL DB Schema Designer (note a Visual SQL-RDF Mapper is also on it's way
7. http://:8890/DAV/JS/ - To view the OAT Tree (there are some experimental demos that are missing from the main demo app etc..)

There's more to come!

Dare Obasanjo's post about the issue of Open Data (or Open Data Access), indicates that the "Open Data" issue is gradually beginning to resonate across a broader audience.

From my perspective on things I prefer to align my articulation of the changes that are occurring across our industry (courtesy of the Internet Inflection) to the MVC pattern.

Re. the Web Versions (or Dimensions of Interaction):

Web 1.0 - (V)iewer (Interactive Web experienced via Browser)

Web 2.0 - (C)ontroller Web (via Web Services API)

Web 3.0 - (M)odel (via the RDF Data Model as the basis for an Open and Standards based Concrete Conceptual Data Model)

The same applies to evolution of Openness:

Early work by Sun and other early UNIX Vendors - (V)iewer (Interaction with the same OS across different hardware platforms)

Open Source Movement - (C)ontroller (Open Access to Application Source Code )

Open Data - (M)odel (*where we are now* Freeing the Date from the Applications and Services while moving the application development focus to a Concrete Conceptual Data Model focus. The Data Web is a classic example.)

In the (C)ontroller realm where the focal point is Application Logic, data access issues aren't obvious (*I recall my battles with Richard Stallman re. the appropriate Open Source License variant for iODBC during the embryonic years of database and data access technology on Linux*). Data is an enigma in this realm, unfortunately. This implies that "Data Lock-in" occurs deliberately, but in most cases, inadvertently when we make Application Logic the focal point of everything. Another example is Web 2.0 in which the norm (unfortunately) is to suck in your data, and then refuse to give you complete ownership over how it is used (including the fact that you may want to share it elsewhere).