Details

Orri Erling

Subscribe

Post Categories

Recent Articles

Display Settings

articles per page.
order.
Showing posts in all categories RefreshRefresh
Faceted Search: Unlimited Data in Interactive Time

Why not see the whole world of data as facets? Well, we'd like to, but there is the feeling that this is not practical.

The old problem has been that it is not really practical to pre-compute counts of everything for all possible combinations of search conditions and counting/grouping/sorting. The actual matches take time.

Well, neither is in fact necessary. When there are large numbers of items matching the conditions, counting them can take time but then this is the beginning of the search, and the user is not even likely to look very closely at the counts. It is enough to see that there are many of one and few of another. If the user already knows the precise predicate or class to look for, then the top-level faceted view is not even needed. The faceted view for guiding search and precise analytics are two different problems.

There are client-side faceted views like Exhibit or our own ODE. The problem with these is that there are a few orders of magnitude difference between the actual database size and what fits on the user agent. This is compounded by the fact that one does not know what to cache on the user agent because of the open nature of the data web. If this were about a fixed workflow, then a good guess would be possible — but we are talking about the data web, the very soul of serendipity and unexpected discovery.

So we made a web service that will do faceted search on arbitrary RDF. If it does not get complete results within a timeout, it will return what it has counted so far, using Virtuoso's Anytime feature. Looking for subjects with some specific combination of properties is however a bit limited, so this will also do JOINs. Many features are one or two JOINs away; take geographical locations or social networks, for example.

Yet a faceted search should be point-and-click, and should not involve a full query construction. We put the compromise at starting with full text or property or class, then navigating down properties or classes, to arbitrary depth, tree-wise. At each step, one can see the matching instances or their classes or properties, all with counts, faceted-style.

This is good enough for queries like 'what do Harry Potter fans also like' or 'who are the authors of articles tagged semantic web and machine learning and published in 2008'. For complex grouping, sub-queries, arithmetic or such, one must write the actual query.

But one can begin with facets, and then continue refining the query by hand since the service also returns SPARQL text. We made a small web interface on top of the service with all logic server side. This proves that the web service is usable and that an interface with no AJAX, and no problems with browser interoperability or such, is possible and easy. Also, the problem of syncing between a user-agent-based store and a database is entirely gone.

If we are working with a known data structure, the user interface should choose the display by the data type and offer links to related reports. This is all easy to build as web pages or AJAX. We show how the generic interface is done in Virtuoso PL, and you can adapt that or rewrite it in PHP, Java, JavaScript, or anything else, to accommodate use-case specific navigation needs such as data format.

The web service takes an XML representation of the search, which is more restricted and easier to process by machine than the SPARQL syntax. The web service returns the results, the SPARQL query it generated, whether the results are complete or not, and some resource use statistics.

The source of the PL functions, Web Service and Virtuoso Server Page (HTML UI) will be available as part of Virtuoso 6.0 and higher. A Programmer's Guide will be available as part of the standard Virtuoso Documentation collection, including the Virtuoso Open Source Edition Website.

# PermaLink Comments [0]
01/09/2009 22:03 GMT Modified: 01/09/2009 17:15 GMT
Virtuoso - Are We Too Clever for Our Own Good? (updated)

"Physician, heal thyself," it is said. We profess to say what the messaging of the semantic web ought to be, but is our own perfect?

I will here engage in some critical introspection as well as amplify on some answers given to Virtuoso-related questions in recent times.

I use some conversations from the Vienna Linked Data Practitioners meeting as a starting point. These views are mine and are limited to the Virtuoso server. These do not apply to the ODS (OpenLink Data Spaces) applications line, OAT (OpenLink Ajax Toolkit), or ODE (OpenLink Data Explorer).

"It is not always clear what the main thrust is, we get the impression that you are spread too thin," said Sören Auer.

Well, personally, I am all for core competence. This is why I do not participate in all the online conversations and groups as much as I could, for example. Time and energy are critical resources and must be invested where they make a difference. In this case, the real core competence is running in the database race. This in itself, come to think of it, is a pretty broad concept.

This is why we put a lot of emphasis on Linked Data and the Data Web for now, as this is the emerging game. This is a deliberate choice, not an outside imperative or built-in limitation. More specifically, this means exposing any pre-existing relational data as linked data plus being the definitive RDF store.

We can do this because we own our database and SQL and data access middleware and have a history of connecting to any RDBMS out there.

The principal message we have been hearing from the RDF field is the call for scale of triple storage. This is even louder than the call for relational mapping. We believe that in time mapping will exceed triple storage as such, once we get some real production strength mappings deployed, enough to outperform RDF warehousing.

There are also RDF middleware things like RDF-ization and demand-driven web harvesting (i.e, the so-called Sponger). These are SPARQL options, thus accessed via standard interfaces. We have little desire to create our own languages or APIs, or to tell people how to program. This is why we recently introduced Sesame- and Jena-compatible APIs to our RDF store. From what we hear, these work. On the other hand, we do not hesitate to move beyond the standards when there is obvious value or necessity. This is why we brought SPARQL up to and beyond SQL expressivity. It is not a case of E3 (Embrace, Extend, Extinguish).

Now, this message could be better reflected in our material on the web. This blog is a rather informal step in this direction; more is to come. For now we concentrate on delivering.

The conventional communications wisdom is to split the message by target audience. For this, we should split the RDF, relational, and web services messages from each other. We believe that a challenger, like the semantic web technology stack, must have a compelling message to tell for it to be interesting. This is not a question of research prototypes. The new technology cannot lack something the installed technology takes for granted.

This is why we do not tend to show things like how to insert and query a few triples: No business out there will insert and query triples for the sake of triples. There must be a more compelling story — for example, turning the whole world into a database. This is why our examples start with things like turning the TPC-H database into RDF, queries and all. Anything less is not interesting. Why would an enterprise that has business intelligence and integration issues way more complex than the rather stereotypical TPC-H even look at a technology that pretends to be all for integration and all for expressivity of queries, yet cannot answer the first question of the entry exam?

The world out there is complex. But maybe we ought to make some simple tutorials? So, as a call to the people out there, tell us what a good tutorial would be. The question is more about figuring out what is out there and adapting these and making a sort of compatibility list. Jena and Sesame stuff ought to run as is. We could offer a webinar to all the data web luminaries showing how to promote the data web message with Virtuoso. After all, why not show it on the best platform?

"You are arrogant. When I read your papers or documentation, the impression I get is that you say you are smart and the reader is stupid."

We should answer in multiple parts.

For general collateral, like web sites and documentation:

The web site gives a confused product image. For the Virtuoso product, we should divide at the top into

  • Data web and RDF - Host linked data, expose relational assets as linked data;
  • Relational Database - Full function, high performance, open source, Federated/Virtual Relational DBMS, expose heterogeneous RDB assets through one point of contact for integration;
  • Web Services - access all the above over standard protocols, dynamic web pages, web hosting.

For each point, one simple statement. We all know what the above things mean?

Then we add a new point about scalability that impacts all the above, namely the Virtuoso version 6 Cluster, meaning that you can do all these things at 10 to 1000 times the scale. This means this much more data or in some cases this much more requests per second. This too is clear.

Far as I am concerned, hosting Java or .NET does not have to be on the front page. Also, we have no great interest in going against Apache when it comes to a web server only situation. The fact that we have a web listener is important for some things but our claim to fame does not rest on this.

Then for documentation and training materials: The documentation should be better. Specifically it should have more of a how-to dimension since nobody reads the whole thing anyhow. About online tutorials, the order of presentation should be different. They do not really reflect what is important at the present moment either.

Now for conference papers: Since taking the data web as a focus area, we have submitted some papers and had some rejected because these do not have enough references and do not explain what is obvious to ourselves.

I think that the communications failure in this case is that we want to talk about end to end solutions and the reviewers expect research. For us, the solution is interesting and exists only if there is an adequate functionality mix for addressing a specific use case. This is why we do not make a paper about query cost model alone because the cost model, while indispensable, is a thing that is taken for granted where we come from. So we mention RDF adaptations to cost model, as these are important to the whole but do not find these to be the justification for a whole paper. If we made papers on this basis, we would have to make five times as many. Maybe we ought to.

"Virtuoso is very big and very difficult"

One thing that is not obvious from the Virtuoso packaging is that the minimum installation is an executable under 10MB and a config file. Two files.

This gives you SQL and SPARQL out of the box. Adding ODBC and JDBC clients is as simple as it gets. After this, there is basic database functionality. Tuning is a matter of a few parameters that are explained on this blog and elsewhere. Also, the full scale installation is available as an Amazon EC2 image, so no installation required.

Now for the difficult side:

Use SQL and SPARQL; use stored procedures whenever there is server side business logic. For some time critical web pages, use VSP. Do not use VSPX. Otherwise, use whatever you are used to — PHP or Java or anything else. For web services, simple is best. Stick to basics. "The engineer is one who can invent a simple thing." Use SQL statements rather than admin UI.

Know that you can start a server with no database file and you get an initial database with nothing extra. The demo database, the way it is produced by installers is cluttered.

We should put this into a couple of use case oriented how-tos.

Also, we should create a network of "friendly local virtuoso geeks" for providing basic training and services so we do not have to explain these things all the time. To all you data-web-ers out there — please sign up and we will provide instructions, etc. Contact Yrjänä Rankka (ghard[at-sign]openlinksw.com), or go through the mailing lists; do not contact me directly.

"OK, we understand that you may be good at the large end of the spectrum but how do you reconcile this with the lightweight or embedded end, like the semantic desktop?"

Now, what is good for one end is usually good for the other. Namely, a database, no matter the scale, needs to have space efficient storage, fast index lookup, and correct query plans. Then there are things that occur only at the high-end, like clustering, but these are separate things. For embedding, the initial memory footprint needs to be small. With Virtuoso, this is accomplished by leaving out some 200 built-in tables and 100,000 lines of SQL procedures that are normally in by default, supporting things such as DAV and diverse other protocols. After all, if SPARQL is all one wants these are not needed.

If one really wants to do one's server logic (like web listener and thread dispatching) oneself, this is not impossible but requires some advice from us. On the other hand, if one wants to have logic for security close to the data, then using stored procedures is recommended; these execute right next to the data, and support inline SPARQL and SQL. Depending on the license status of the other code, some special licensing arrangements may apply.

We are talking about such things with different parties at present.

"How webby are you? What is webby?"

"Webby means distributed, heterogeneous, open; not monolithic consolidation of everything."

We are philosophically webby. We come from open standards; we are after all called OpenLink; our history consists of connecting things. We believe in choice — the user should be able to pick the best of breed for components and have them work together. We cannot and do not wish to force replacement of existing assets. Transforming data on the fly and connecting systems, leaving data where it originally resides, is the first preference. For the data web, the first preference is a federation of independent SPARQL end points. When there is harvesting, we prefer to do it on demand, as with our Sponger. With the immense amount of data out there we believe in finding what is relevant when it is relevant, preferably close at hand, leveraging things like social networks. With a data web, many things which are now siloized, such as marketplaces and social networks, will return to the open.

Google-style crawling of everything becomes less practical if one needs to run complex ad hoc queries against the mass of data. For these types of scenarios, if one needs to warehouse, the data cloud will offer solutions where one pays for database on demand. While we believe in loosely coupled federation where possible, we have serious work on the scalability side for the data center and the compute-on-demand cloud.

"How does OpenLink see the next five years unfolding?"

Personally, I think we have the basics for the birth of a new inflection in the knowledge economy. The URI is the unit of exchange; its value and competitive edge lie in the data it links you with. A name without context is worth little, but as a name gets more use, more information can be found through that name. This is anything from financial statistics, to legal precedents, to news reporting or government data. Right now, if the SEC just added one line of markup to the XBRL template, this would instantaneously make all SEC-mandated reporting into linked data via GRDDL.

The URI is a carrier of brand. An information brand gets traffic and references, and this can be monetized in diverse ways. The key word is context. Information overload is here to stay, and only better context offers the needed increase in productivity to stay ahead of the flood.

Semantic technologies on the whole can help with this. Why these should be semantic web or data web technologies as opposed to just semantic is the linked data value proposition. Even smart islands are still islands. Agility, scale, and scope, depend on the possibility of combining things. Therefore common terminologies and dereferenceability and discoverability are important. Without these, we are at best dealing with closed systems even if they were smart. The expert systems of the 1980s are a case in point.

Ever since the .com era, the URL has been a brand. Now it becomes a URI. Thus, entirely hiding the URI from the user experience is not always desirable. The URI is a sort of handle on the provenance and where more can be found; besides, people are already used to these.

With linked data, information value-add products become easy to build and deploy. They can be basically just canned SPARQL queries combining data in a useful and insightful manner. And where there is traffic there can be monetization, whether by advertizing, subscription, or other means. Such possibilities are a natural adjunct to the blogosphere. To publish analysis, one no longer needs to be a think tank or media company. We could call this scenario the birth of a meshup economy.

For OpenLink itself, this is our roadmap. The immediate future is about getting our high end offerings like clustered RDF storage generally available, both on the cloud and for private data centers. Ourselves, we will offer the whole Linked Open Data cloud as a database. The single feature to come in version 2 of this is fully automatic partitioning and repartitioning for on-demand scale; now, you have to choose how many partitions you have.

This makes some things possible that were hard thus far.

On the mapping front, we go for real-scale data integration scenarios where we can show that SPARQL can unify terms and concepts across databases, yet bring no added cost for complex queries. Enterprises can use their existing warehouses and have an added level of abstraction, the possibility of cross systems interlinking, the advantages of using the same taxonomies and ontologies across systems, and so forth.

Then there will be developments in the direction of smarter web harvesting on demand with the Virtuoso Sponger, and federation of heterogeneous SPARQL end points. The federation is not so unlike clustering, except the time scales are 2 orders of magnitude longer. The work on SPARQL end point statistics and data set description and discovery is a good development in the community.

Then there will be NLP integration, as exemplified by the Open Calais linked data wrapper and more.

Can we pull this off or is this being spread too thin? We know from experience that all this can be accomplished. Scale is already here; we show it with the billion triples set. Mapping is here; we showed it last in the Berlin Benchmark. We will also show some TPC-H results after we get a little quiet after the ISWC event. Then there is ongoing maintenance but with this we have shown a steady turnaround and quick time to fix for pretty much anything.

# PermaLink Comments [0]
10/26/2008 12:15 GMT Modified: 10/27/2008 12:07 GMT
State of the Semantic Web, Part 2 - The Technical Questions (updated)

Here I will talk about some more technical questions that came up. This is mostly general; Virtuoso specific questions and answers are separate.

"How to Bootstrap? Where will the triples come from?"

There are already wrappers producing RDF from many applications. Since any structured or semi-structured data can be converted to RDF and often there is even a pre-existing terminology for the application domain, the availability of the data per se is not the concern.

The triples may come from any application or database, but they will not come from the end user directly. There was a good talk about photograph annotation in Vienna, describing many ways of deriving metadata for photos. The essential wisdom is annotating on the spot and wherever possible doing so automatically. The consumer is very unlikely to go annotate photos after the fact. Further, one can infer that photos made with the same camera around the same time are from the same location. There are other such heuristics. In this use case, the end user does not need to see triples. There is some benefit though in using commonly used geographical terminology for linking to other data sources.

"How will one develop applications?"

I'd say one will develop them much the same way as thus far. In PHP, for example. Whether one's query language is SPARQL or SQL does not make a large difference in how basic web UI is made.

A SPARQL end-point is no more an end-user item than a SQL command-line is.

A common mistake among techies is that they think the data structure and user experience can or ought to be of the same structure. The UI dialogs do not, for example, have to have a 1:1 correspondence with SQL tables.

The idea of generating UI from data, whether relational or data-web, is so seductive that generation upon generation of developers fall for it, repeatedly. Even I, at OpenLink, after supposedly having been around the block a couple of times made some experiments around the topic. What does make sense is putting a thin wrapper or HTML around the application, using XSLT and such for formatting. Since the model does allow for unforeseen properties of data, one can build a viewer for these alongside the regular forms. For this, Ajax technologies like OAT (the OpenLink AJAX Toolkit) will be good.

The UI ought not to completely hide the URIs of the data from the user. It should offer a drill down to faceted views of the triples for example. Remember when Xerox talked about graphical user interfaces in 1980? "Don't mode me in" was the slogan, as I recall.

Since then, we have vacillated between modal and non-modal interaction models. Repetitive workflows like order entry go best modally and are anyway being replaced by web services. Also workflows that are very infrequent benefit from modality; take personal network setup wizards, for example. But enabling the knowledge worker is a domain that by its nature must retain some respect for human intelligence and not kill this by denying access to the underlying data, including provenance and URIs. Face it: the world is not getting simpler. It is increasingly data dependent and when this is so, having semantics and flexibility of access for the data is important.

For a real-time task-oriented user interface like a fighter plane cockpit, one will not show URIs unless specifically requested. For planning fighter sorties though, there is some potential benefit in having all data such as friendly and hostile assets, geography, organizational structure, etc., as linked data. It makes for more flexible querying. Linked data does not per se mean open, so one can be joinable with open data through using the same identifiers even while maintaining arbitrary levels of security and compartmentalization.

For automating tasks that every time involve the same data and queries, RDF has no intrinsic superiority. Thus the user interfaces in places where RDF will have real edge must be more capable of ad hoc viewing and navigation than regular real-time or line of business user interfaces.

The OpenLink Data Explorer idea of a "data behind the web page" view goes in this direction. Read the web as before, then hit a switch to go to the data view. There are and will be separate clarifications and demos about this.

"What of the proliferation of standards? Does this not look too tangled, no clear identity? How would one know where to begin?"

When SWEO was beginning, there was an endlessly protracted discussion of the so-called layer cake. This acronym jungle is not good messaging. Just say linked, flexibly repurpose-able data, and rich vocabularies and structure. Just the right amount of structure for the application, less rigid and easier to change than relational.

Do not even mention the different serialization formats. Just say that it fits on top of the accepted web infrastructure — HTTP, URIs, and XML where desired.

It is misleading to say inference is a box at some specific place in the diagram. Inference of different types may or may not take place at diverse points, whether presentation or storage, on demand or as a preprocessing step. Since there is structure and semantics, inference is possible if desired.

"Can I make a social network application in RDF only, with no RDBMS?"

Yes, in principle, but what do you have in mind? The answer is very context dependent. The person posing the question had an E-learning system in mind, with things such as course catalogues, course material, etc. In such a case, RDF is a great match, especially since the user count will not be in the millions. No university has that many students and anyway they do not hang online browsing the course catalogue.

On the other hand, if I think of making a social network site with RDF as the exclusive data model, I see things that would be very inefficient. For example, keeping a count of logins or the last time of login would be by default several times less efficient than with a RDBMS.

If some application is really large scale and has a knowable workload profile, like any social network does, then some task-specific data structure is simply economical. This does not mean that the application language cannot be SPARQL but this means that the storage format must be tuned to favor some operations over others, relational style. This is a matter of cost more than of feasibility. Ten servers cost less than a hundred and have failures ten times less frequently.

In the near term we will see the birth of an application paradigm for the data web. The data will be open, exposed, first-class citizen; yet the user experience will not have to be in a 1:1 image of the data.

# PermaLink Comments [0]
10/26/2008 12:02 GMT Modified: 10/27/2008 11:28 GMT
         
Powered by OpenLink Virtuoso Universal Server
Running on Linux platform